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Intron Name: Anas_platyrhynchos_platyrhynchos_6_12797145_12800872_R

Intron Information:

Intron Rank:

136218

Intron Class:

major

Intron Phase:

Intron Coordinates:

12797145 - 12800872

Intron Length:

3728

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTGAGGTTT

5'SS Class:

strong_major

3'SS Sequence:

ATTTGCTCCTAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TACTGAA

U12 Branch Point Sequence:

CCTTACTGAAAT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.7

0.72

0.9

77.3

33.4

Major BPS

74.4

0.61

0.9

63.6

35.5

Major PPT

65.8

0.36

1.1

68.8

36.9

Minor 5ss

37.4

-1.4

3.5

52.2

Minor BPS

53.7

0.19

1.8

71.24

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000020720

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000033520

12795893 - 12826804

30912

ENSAPLT00000026368

12795893 - 12826804

30912

ENSAPLT00000034758

12795893 - 12805734

9842