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Intron Name: Anas_platyrhynchos_platyrhynchos_6_12797145_12802373_R

Intron Information:

Intron Rank:

136247

Intron Class:

major

Intron Phase:

Intron Coordinates:

12797145 - 12802373

Intron Length:

5229

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTATGTGGC

5'SS Class:

strong_major

3'SS Sequence:

ATTTGCTCCTAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TACTGAA

U12 Branch Point Sequence:

CCTTACTGAAAT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.2

0.85

0.9

72.3

37.8

Major BPS

74.4

0.61

0.9

63.6

35.5

Major PPT

65.8

0.36

1.1

68.8

36.9

Minor 5ss

39.1

-1.2

3.1

52.5

44.7

Minor BPS

53.7

0.19

1.8

71.24

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000020720

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000046043

12795893 - 12826804

30912