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Intron Name: Anas_platyrhynchos_platyrhynchos_6_13331501_13339264_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

13331501 - 13339264

Intron Length:

7764

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TCT|GTGAGTAAA

5'SS Class:

major

3'SS Sequence:

TCTTTCTGCACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

TTTTTATTATAC

Flanking Amino Acid:

FTQTSWRRSSGGYSAPSFSP

Intron Amino Acid Position:

787

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

72.3

0.53

1.1

72.6

33.5

Major BPS

96.5

1.15

0.6

34.2

Major PPT

79.6

0.67

0.9

75.6

32.9

Minor 5ss

32.5

-2

2.8

43.1

43.9

Minor BPS

0.11

1.9

72.57

38.1

Associated Gene:

Gene:

CCSER2

Ensembl Gene ID:

ENSAPLG00000014916

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000015551

13322796 - 13373944

51149