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Intron Name: Anas_platyrhynchos_platyrhynchos_6_13339364_13340443_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

13339364 - 13340443

Intron Length:

1080

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTT|GTAAGTACA

5'SS Class:

major

3'SS Sequence:

TTCGGGGGTTAAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TTCTAAT

U12 Branch Point Sequence:

TTTTTTCTAATA

Flanking Amino Acid:

ETINQLEHQLATRCNCQRDN

Intron Amino Acid Position:

754

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.3

0.64

75.4

33.7

Major BPS

94.5

1.11

0.6

92.2

14.6

Major PPT

50.1

1.2

51.8

46.3

Minor 5ss

38.6

-1.3

2.7

49.8

40.3

Minor BPS

66.6

0.52

1.6

79.19

30.8

Associated Gene:

Gene:

CCSER2

Ensembl Gene ID:

ENSAPLG00000014916

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000024524

13322072 - 13373944

51873

ENSAPLT00000015551

13322796 - 13373944

51149