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Intron Name: Anas_platyrhynchos_platyrhynchos_6_13340531_13342726_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

13340531 - 13342726

Intron Length:

2196

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAATGAC

5'SS Class:

strong_major

3'SS Sequence:

TGTTCTGTTGCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTGTAT

U12 Branch Point Sequence:

TATTGTCCAATG

Flanking Amino Acid:

PQEPETTYSKTEDLVNEIRK

Intron Amino Acid Position:

725

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.4

0.86

0.9

78.2

29.5

Major BPS

71.5

0.53

1.4

71.7

44.6

Major PPT

82.4

0.73

0.9

76.8

37.3

Minor 5ss

32.3

-2

3.3

42.9

44.7

Minor BPS

43.3

-0.6

2.2

53.28

Associated Gene:

Gene:

CCSER2

Ensembl Gene ID:

ENSAPLG00000014916

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000015551

13322796 - 13373944

51149

ENSAPLT00000024524

13322072 - 13373944

51873