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Intron Name: Anas_platyrhynchos_platyrhynchos_6_13342814_13351965_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

13342814 - 13351965

Intron Length:

9152

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGCTGT

5'SS Class:

strong_major

3'SS Sequence:

CTTATTCTCTTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTTAT

U12 Branch Point Sequence:

GATTTCTTATTC

Flanking Amino Acid:

LLKLKRLLHQNDENVSLEDI

Intron Amino Acid Position:

696

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.7

0.94

0.9

78.8

38.3

Major BPS

91.4

1.03

0.7

79.9

34.9

Major PPT

78.5

0.64

0.8

77.3

31.3

Minor 5ss

45.6

-0.5

2.9

46.2

Minor BPS

61.7

0.35

1.6

67.85

37.8

Associated Gene:

Gene:

CCSER2

Ensembl Gene ID:

ENSAPLG00000014916

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000024524

13322072 - 13373944

51873

ENSAPLT00000015551

13322796 - 13373944

51149