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Intron Name: Anas_platyrhynchos_platyrhynchos_6_13352956_13355849_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

13352956 - 13355849

Intron Length:

2894

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGTAAA

5'SS Class:

strong_major

3'SS Sequence:

TCCTACTCTATAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

TTTTTTTTACTT

Flanking Amino Acid:

DLPEDPPHDKEECENMSRYD

Intron Amino Acid Position:

576

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

97.9

1.13

0.6

92.3

16.1

Major BPS

96.5

1.15

0.6

34.2

Major PPT

74.9

0.56

0.8

68.9

31.4

Minor 5ss

-1.7

2.7

41.8

44.8

Minor BPS

70.1

0.71

1.5

86.64

33.8

Associated Gene:

Gene:

CCSER2

Ensembl Gene ID:

ENSAPLG00000014916

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000024524

13322072 - 13373944

51873

ENSAPLT00000015551

13322796 - 13373944

51149