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Intron Name: Anas_platyrhynchos_platyrhynchos_6_13355941_13371363_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

13355941 - 13371363

Intron Length:

15423

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATA|GTATGTATT

5'SS Class:

major

3'SS Sequence:

TTCTTTCTTGTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GTATCAC

U12 Branch Point Sequence:

ATCACGAAAACA

Flanking Amino Acid:

SYESSEMNSIDILNNLDSCD

Intron Amino Acid Position:

546

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

73.8

0.56

34.3

Major BPS

60.6

0.26

1.3

65.7

Major PPT

88.1

0.86

0.6

84.9

22.8

Minor 5ss

49.6

-0

2.5

70.2

34.8

Minor BPS

40.9

-0.6

2.4

55.19

43.5

Associated Gene:

Gene:

CCSER2

Ensembl Gene ID:

ENSAPLG00000014916

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000024524

13322072 - 13373944

51873

ENSAPLT00000015551

13322796 - 13373944

51149