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Intron Name: Anas_platyrhynchos_platyrhynchos_6_13720827_13721615_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

13720827 - 13721615

Intron Length:

789

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAATCAA

5'SS Class:

strong_major

3'SS Sequence:

TTGCTTTTAATAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTTTTAT

U12 Branch Point Sequence:

TTGCTTTTAATA

Flanking Amino Acid:

FEEQFYKQTGRSPLKEDRVP

Intron Amino Acid Position:

806

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.7

0.84

0.9

76.5

34.2

Major BPS

84.1

0.85

0.9

75.3

39.4

Major PPT

0.58

0.9

73.5

35.8

Minor 5ss

32.9

-2

40.7

45.5

Minor BPS

67.9

0.56

1.2

71.78

34.7

Associated Gene:

Gene:

FAM13C

Ensembl Gene ID:

ENSAPLG00000015441

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000008352

13720703 - 13841812

121110

ENSAPLT00000020997

13720703 - 13767302

46600

ENSAPLT00000016141

13720703 - 13770149

49447