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Intron Name: Anas_platyrhynchos_platyrhynchos_6_13735041_13736473_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

13735041 - 13736473

Intron Length:

1433

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTAAGATAA

5'SS Class:

strong_major

3'SS Sequence:

ATGTTACATTCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

TTTATGTTACAT

Flanking Amino Acid:

EKFEQEKKYLPSHGDKTSNP

Intron Amino Acid Position:

576

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.3

0.81

0.9

75.7

29.2

Major BPS

96.5

1.15

0.6

34.2

Major PPT

71.4

0.48

42.3

Minor 5ss

37.4

-1.4

44.1

44.7

Minor BPS

46.7

-0.1

2.3

73.28

43.5

Associated Gene:

Gene:

FAM13C

Ensembl Gene ID:

ENSAPLG00000015441

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000020997

13720703 - 13767302

46600

ENSAPLT00000016141

13720703 - 13770149

49447

ENSAPLT00000008352

13720703 - 13841812

121110