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Intron Name: Anas_platyrhynchos_platyrhynchos_6_13902662_13905228_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

13902662 - 13905228

Intron Length:

2567

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGC|GTGAGTAAA

5'SS Class:

major

3'SS Sequence:

TTCTGAATTTCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAC

U12 Branch Point Sequence:

GAATTCTGAATT

Flanking Amino Acid:

KKQLRAAQLQHSEKMAQYLE

Intron Amino Acid Position:

134

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

67.2

0.4

1.3

70.2

37.7

Major BPS

89.7

0.98

0.7

89.9

Major PPT

78.2

0.63

0.9

74.5

39.1

Minor 5ss

30.5

-2.2

2.6

28.7

36.1

Minor BPS

61.6

0.44

1.4

71.76

38.8

Associated Gene:

Gene:

CCDC6

Ensembl Gene ID:

ENSAPLG00000008230

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000008570

13891808 - 13917742

25935