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Intron Name: Anas_platyrhynchos_platyrhynchos_6_13911913_13917736_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

13911913 - 13917736

Intron Length:

5824

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGTGGT

5'SS Class:

strong_major

3'SS Sequence:

CCTAAATTTTTAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTAAAA

U12 Branch Point Sequence:

ATCTCCTAAATT

Flanking Amino Acid:

MQLQHEKAELEQ

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

95.7

1.08

0.7

85.2

32.2

Major BPS

73.1

0.58

79.6

29.1

Major PPT

70.1

0.45

0.9

66.1

39.4

Minor 5ss

34.4

-1.8

3.3

49.7

46.6

Minor BPS

69.3

0.68

1.6

81.92

40.2

Associated Gene:

Gene:

CCDC6

Ensembl Gene ID:

ENSAPLG00000008230

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000008570

13891808 - 13917742

25935