About Basic Search Advanced Search Downloads
Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_6_13973367_13986017_R


Intron Information:

Intron Rank:
35

Intron Class:
major

Intron Phase:
1

Intron Coordinates:
13973367 - 13986017

Intron Length:
12651

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
TGA|GTGAGTTGC

5'SS Class:
major

3'SS Sequence:
TTGTAAATCACAG|G

3'SS Class:
major_PPT

U2 Branch Point Sequence:
TTTTAAT

U12 Branch Point Sequence:
ACCTTTTTAATC

Flanking Amino Acid:
RYSYLTEPGMSPQSPCERTD

Intron Amino Acid Position:
1443

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
70.9
0.49
1
63
38.7

Major BPS
99.5
1.23
0.5
98.2
4.2

Major PPT
69.9
0.45
1
62.7
41.9

Minor 5ss
36.4
-1.5
2.8
40.1
40

Minor BPS
64.1
0.42
1.2
63.17
37.5

Associated Gene:

Gene:
ANK3

Ensembl Gene ID:

Chromosome:
6

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

13951477 - 14103581
152105

13951477 - 14103581
152105