About Basic Search Advanced Search Downloads

© 2019-2022 Kanadia Lab,
PNB, Uconn

Construction by: Audrey Weber

Contact Us

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_6_14026840_14027034_R

Intron Information:

Intron Rank:
22
Intron Class:
major
Intron Phase:
1
Intron Coordinates:
14026840 - 14027034
Intron Length:
195

Sequence Information:

Terminal Dinucleotides:
GT-AG
5'SS Sequence:
AAG|GTATTTGAA
5'SS Class:
major
3'SS Sequence:
TTAAATCATGCAG|T
3'SS Class:
major_PPT
U2 Branch Point Sequence:
ATTTAAT
U12 Branch Point Sequence:
TTTTATTTAATT
Flanking Amino Acid:
NEVLDMSDDEVRKANAPEIL
Intron Amino Acid Position:
825

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev
Major 5ss
77.9
0.66
1
72.2
32.5
Major BPS
90.7
1.01
0.7
90
19.9
Major PPT
69.7
0.44
1
63.2
42.6
Minor 5ss
38.2
-1.3
3.1
49.1
47.1
Minor BPS
78.7
0.98
1.3
92.74
29.1

Associated Gene:

Gene:
ANK3
Ensembl Gene ID:
ENSAPLG00000008610
Chromosome:
6

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length
ENSAPLT00000009208
13951477 - 14103581
152105