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Intron Name: Anas_platyrhynchos_platyrhynchos_6_14080830_14084227_R


Intron Information:

Intron Rank:
5

Intron Class:
major

Intron Phase:
0

Intron Coordinates:
14080830 - 14084227

Intron Length:
3398

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
GAG|GTAAAAGTT

5'SS Class:
strong_major

3'SS Sequence:
TTGTATGTTGCAG|G

3'SS Class:
major_PPT

U2 Branch Point Sequence:
ATTGTAT

U12 Branch Point Sequence:
TAGGTGTTGAGA

Flanking Amino Acid:
NGASQSLATEDGFTPLAVAL

Intron Amino Acid Position:
146

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
84
0.8
0.9
81.3
30.4

Major BPS
62.7
0.32
1.4
63.4
44

Major PPT
79
0.65
1
73.2
41.7

Minor 5ss
35.7
-1.6
3.7
55.7
48.5

Minor BPS
41.3
-0.6
2.3
49.62
42.1

Associated Gene:

Gene:
ANK3

Ensembl Gene ID:

Chromosome:
6

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

13951477 - 14103581
152105

13951477 - 14103581
152105