Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_6_14084327_14088110_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

14084327 - 14088110

Intron Length:

3784

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAAGTAA

5'SS Class:

strong_major

3'SS Sequence:

TTTCCTATTTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGTTAAT

U12 Branch Point Sequence:

GTTTTCCTATTT

Flanking Amino Acid:

NRANVNAQSQNGFTPLYMAA

Intron Amino Acid Position:

113

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.4

0.74

74.3

31.9

Major BPS

84.4

0.85

34.5

Major PPT

87.5

0.84

0.7

85.5

27.4

Minor 5ss

35.4

-1.7

3.3

46.2

49.1

Minor BPS

54.3

0.21

1.9

76.98

39.8

Associated Gene:

Gene:

ANK3

Ensembl Gene ID:

ENSAPLG00000008610

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000027875

13951477 - 14103581

152105

ENSAPLT00000009208

13951477 - 14103581

152105