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Intron Name: Anas_platyrhynchos_platyrhynchos_6_14626_14708_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

14626 - 14708

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGGGGCCG

5'SS Class:

major

3'SS Sequence:

CTGCGTCCCGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CGCTGAC

U12 Branch Point Sequence:

AGCCCGCTGACG

Flanking Amino Acid:

FGNVCLYQHQDTGAKVAVKS

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

72.4

0.53

1.1

44.7

Major BPS

53.9

0.1

1.2

46.4

38.9

Major PPT

68.3

0.41

0.9

61.5

34.9

Minor 5ss

24.2

-3

3.2

29.7

43.3

Minor BPS

40.5

-0.8

2.3

44.06

41.4

Associated Gene:

Gene:

CHUK

Ensembl Gene ID:

ENSAPLG00000011503

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000039931

12183 - 46227

34045

ENSAPLT00000037450

14485 - 44896

30412

ENSAPLT00000012207

12183 - 45972

33790