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Intron Name: Anas_platyrhynchos_platyrhynchos_6_1474411_1485935_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1474411 - 1485935

Intron Length:

11525

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTATGTTTC

5'SS Class:

strong_major

3'SS Sequence:

GCTTTAATTGAAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTATAAT

U12 Branch Point Sequence:

TTTGCTTTAATT

Flanking Amino Acid:

ITVLDNDVEETKDPQLHLFL

Intron Amino Acid Position:

432

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.6

0.93

0.8

Major BPS

87.8

0.94

0.9

86.6

28.1

Major PPT

65.9

0.36

1.1

65.3

39.3

Minor 5ss

53.1

0.1

2.3

69.7

41.2

Minor BPS

80.1

1.02

1.2

91.31

32.6

Associated Gene:

Gene:

PCDH15

Ensembl Gene ID:

ENSAPLG00000003312

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000003398

1311071 - 1609417

298347