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Intron Name: Anas_platyrhynchos_platyrhynchos_6_14804_15818_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

14804 - 15818

Intron Length:

1015

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAA|GTGAGTGCG

5'SS Class:

major

3'SS Sequence:

TCCATGTGCCTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTCAT

U12 Branch Point Sequence:

TTTTCATCAAGA

Flanking Amino Acid:

RWCHEIDIMKKLNHPNVVKA

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.6

0.7

0.9

68.6

36.4

Major BPS

100

1.24

0.5

100

Major PPT

60.7

0.24

53.1

41.4

Minor 5ss

29.3

-2.4

3.1

32.9

35.6

Minor BPS

57.3

0.23

2.1

77.1

39.6

Associated Gene:

Gene:

CHUK

Ensembl Gene ID:

ENSAPLG00000011503

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000039931

12183 - 46227

34045

ENSAPLT00000037450

14485 - 44896

30412

ENSAPLT00000012207

12183 - 45972

33790