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Intron Name: Anas_platyrhynchos_platyrhynchos_6_14809274_14814091_R


Intron Information:

Intron Rank:
3

Intron Class:
major

Intron Phase:
2

Intron Coordinates:
14809274 - 14814091

Intron Length:
4818

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
ACA|GTAAGACCT

5'SS Class:
major

3'SS Sequence:
CTTTCACATACAG|T

3'SS Class:
major_PPT

U2 Branch Point Sequence:
ACTTAAT

U12 Branch Point Sequence:
TTTTCTTTCACA

Flanking Amino Acid:
ESLLLTDPVIHGAKYNLLAY

Intron Amino Acid Position:
119

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
70.9
0.49
1.1
63.1
41.4

Major BPS
78.2
0.7
1
77.9
32.1

Major PPT
76.5
0.6
0.9
70.1
34.5

Minor 5ss
36.8
-1.5
3.2
55.6
42

Minor BPS
75.9
0.81
1.6
86.93
31.8

Associated Gene:

Gene:
RTKN2

Ensembl Gene ID:

Chromosome:
6

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

14795497 - 14817015
21519