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Intron Name: Anas_platyrhynchos_platyrhynchos_6_15111206_15112190_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

15111206 - 15112190

Intron Length:

985

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACG|GTAAGGAAA

5'SS Class:

strong_major

3'SS Sequence:

TTTTGTATTTCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTAAAT

U12 Branch Point Sequence:

TTCTGCTTATTT

Flanking Amino Acid:

KTAMSWVKKDAKIAWKRAVR

Intron Amino Acid Position:

1585

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.3

0.76

75.2

36.2

Major BPS

82.3

0.8

0.9

87.6

25.7

Major PPT

87.9

0.85

0.8

85.7

33.4

Minor 5ss

32.1

-2

3.1

40.3

45.6

Minor BPS

58.9

0.36

79.24

43.6

Associated Gene:

Gene:

JMJD1C

Ensembl Gene ID:

ENSAPLG00000011455

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000045692

15092235 - 15249994

157760

ENSAPLT00000023460

15092235 - 15199136

106902

ENSAPLT00000011984

15092235 - 15254338

162104