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Intron Name: Anas_platyrhynchos_platyrhynchos_6_15125309_15125426_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

15125309 - 15125426

Intron Length:

118

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAC|GTAGATACA

5'SS Class:

major

3'SS Sequence:

AAACTATTTTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TATTAAT

U12 Branch Point Sequence:

AGTCTATTAATC

Flanking Amino Acid:

RSNQNSNTVHGHYTRAQANS

Intron Amino Acid Position:

227

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.26

1.4

64.9

41.1

Major BPS

91.8

1.04

0.7

90.2

19.3

Major PPT

67.4

0.39

63.6

Minor 5ss

35.4

-1.7

41.4

38.6

Minor BPS

55.8

0.16

1.6

64.16

34.7

Associated Gene:

Gene:

JMJD1C

Ensembl Gene ID:

ENSAPLG00000011455

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000045692

15092235 - 15249994

157760

ENSAPLT00000023460

15092235 - 15199136

106902

ENSAPLT00000011984

15092235 - 15254338

162104