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Intron Name: Anas_platyrhynchos_platyrhynchos_6_15267399_15284403_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

15267399 - 15284403

Intron Length:

17005

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CGT|GTGAGTGGG

5'SS Class:

major

3'SS Sequence:

TATTTTCCAATAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

AAATCCTGAAAA

Flanking Amino Acid:

MVSWMISRAVVLVFGMLYPA

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

67.4

0.41

1.1

56.1

43.1

Major BPS

96.5

1.15

0.6

34.2

Major PPT

74.6

0.55

0.9

71.3

34.2

Minor 5ss

28.6

-2.5

3.1

31.9

42.5

Minor BPS

60.8

0.34

1.5

67.05

Associated Gene:

Gene:

REEP3

Ensembl Gene ID:

ENSAPLG00000011839

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000012345

15267294 - 15302192

34899