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Intron Name: Anas_platyrhynchos_platyrhynchos_6_1527786_1531955_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1527786 - 1531955

Intron Length:

4170

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAT|GTAAGTGTG

5'SS Class:

strong_major

3'SS Sequence:

ATTTACTCCCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATTTCAG

U12 Branch Point Sequence:

TACCCATTTACT

Flanking Amino Acid:

TRYFVIVQANDRAQNLNERR

Intron Amino Acid Position:

232

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.8

78.2

36.4

Major BPS

67.2

0.43

1.5

77.4

37.3

Major PPT

75.8

0.58

0.9

66.8

39.6

Minor 5ss

38.7

-1.3

3.4

53.8

43.6

Minor BPS

52.4

0.15

72.21

43.8

Associated Gene:

Gene:

PCDH15

Ensembl Gene ID:

ENSAPLG00000003312

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000003398

1311071 - 1609417

298347