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Intron Name: Anas_platyrhynchos_platyrhynchos_6_15297804_15301135_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

15297804 - 15301135

Intron Length:

3332

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGTATC

5'SS Class:

strong_major

3'SS Sequence:

CTGCTTTTTAAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

TTTTTATTAAAG

Flanking Amino Acid:

KTRASANEPSGYKIPMEKNP

Intron Amino Acid Position:

189

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

98.5

1.14

0.6

94.3

17.7

Major BPS

96.5

1.15

0.6

34.2

Major PPT

0.52

73.8

34.6

Minor 5ss

40.3

-1.1

2.8

43.3

Minor BPS

64.6

0.32

1.8

73.71

38.2

Associated Gene:

Gene:

REEP3

Ensembl Gene ID:

ENSAPLG00000011839

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000012345

15267294 - 15302192

34899