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Intron Name: Anas_platyrhynchos_platyrhynchos_6_15301288_15302019_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

15301288 - 15302019

Intron Length:

732

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

GAG|GCAAGTATA

5'SS Class:

strong_major

3'SS Sequence:

TTTTTCCCCTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTAAG

U12 Branch Point Sequence:

ACTCTTTTAAGT

Flanking Amino Acid:

SVKTIKGRKEIRYGSLKYRV

Intron Amino Acid Position:

240

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

99.3

1.16

0.7

93.2

21.3

Major BPS

75.6

0.64

1.5

34.5

Major PPT

87.1

0.83

0.6

85.7

21.4

Minor 5ss

-2.4

3.8

41.8

44.8

Minor BPS

57.3

0.31

1.6

70.72

40.8

Associated Gene:

Gene:

REEP3

Ensembl Gene ID:

ENSAPLG00000011839

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000012345

15267294 - 15302192

34899