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Intron Name: Anas_platyrhynchos_platyrhynchos_6_15314281_15315283_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

15314281 - 15315283

Intron Length:

1003

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GTT|GTAAGTAGT

5'SS Class:

major

3'SS Sequence:

TCTTTCCTGTTAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTGTCAT

U12 Branch Point Sequence:

TCATCATTGATT

Flanking Amino Acid:

TPGVIFLLLSFMLPESPRWL

Intron Amino Acid Position:

187

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.4

0.65

76.5

38.6

Major BPS

84.8

0.86

1.1

85.7

34.9

Major PPT

76.7

0.6

0.9

77.7

31.1

Minor 5ss

-1.1

2.9

57.4

41.1

Minor BPS

63.3

0.5

1.6

76.89

39.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000011955

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000026298

15310639 - 15322356

11718

ENSAPLT00000012444

15308086 - 15328322

20237

ENSAPLT00000035995

15309159 - 15331959

22801