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Intron Name: Anas_platyrhynchos_platyrhynchos_6_15327433_15331926_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

15327433 - 15331926

Intron Length:

4494

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAC|GTAAACCAT

5'SS Class:

major

3'SS Sequence:

GCAGCAGAGAAAG|A

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

GACTAAT

U12 Branch Point Sequence:

TGTTGACTAATA

Flanking Amino Acid:

LYSIFLPLSYKEVNFSHYHL

Intron Amino Acid Position:

488

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

63.1

0.31

1.4

62.1

44.1

Major BPS

0.47

1.2

69.9

35.3

Major PPT

42.6

-0.4

1.1

29.7

34.6

Minor 5ss

40.3

-1.1

3.2

55.1

42.8

Minor BPS

-0.2

2.2

66.19

40.1

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000011955

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000035995

15309159 - 15331959

22801