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Intron Name: Anas_platyrhynchos_platyrhynchos_6_1537567_1549118_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1537567 - 1549118

Intron Length:

11552

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTCAGATTT

5'SS Class:

major

3'SS Sequence:

CCTGTTCTTGCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

TGGGTTTTAATA

Flanking Amino Acid:

QQQYYVAVNELTPVGTTIFT

Intron Amino Acid Position:

155

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.3

0.69

1.2

81.6

33.2

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

82.3

0.73

0.8

76.3

32.3

Minor 5ss

39.3

-1.2

3.2

56.7

47.5

Minor BPS

0.28

1.4

62.68

38.6

Associated Gene:

Gene:

PCDH15

Ensembl Gene ID:

ENSAPLG00000003312

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000003398

1311071 - 1609417

298347