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Intron Name: Anas_platyrhynchos_platyrhynchos_6_15598379_15608875_F

Intron Information:

Intron Rank:

135289

Intron Class:

major

Intron Phase:

Intron Coordinates:

15598379 - 15608875

Intron Length:

10497

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGAGCAGA

5'SS Class:

strong_major

3'SS Sequence:

TGTCTTACTACAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATAAAAT

U12 Branch Point Sequence:

CTTGTCTTACTA

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.3

0.83

0.9

74.1

38.4

Major BPS

61.8

0.29

1.1

67.7

34.6

Major PPT

0.68

0.9

73.7

35.7

Minor 5ss

33.3

-1.9

2.8

45.7

Minor BPS

55.3

0.16

1.7

65.77

41.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000022775

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000027754

15598276 - 15613073

14798