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Intron Name: Anas_platyrhynchos_platyrhynchos_6_15833273_15833874_F

Intron Information:

Intron Rank:

134501

Intron Class:

major

Intron Phase:

Intron Coordinates:

15833273 - 15833874

Intron Length:

602

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGGCAGT

5'SS Class:

strong_major

3'SS Sequence:

TTTTTTTATGAAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

TTTTTTTTATGA

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.6

0.72

72.7

44.5

Major BPS

96.5

1.15

0.6

34.2

Major PPT

80.3

0.68

83.7

30.5

Minor 5ss

39.7

-1.2

3.2

57.4

46.9

Minor BPS

58.6

0.27

1.9

74.08

38.4

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000022297

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000034102

15832912 - 15834564

1653