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Intron Name: Anas_platyrhynchos_platyrhynchos_6_15898129_15899856_F

Intron Information:

Intron Rank:

145731

Intron Class:

major

Intron Phase:

Intron Coordinates:

15898129 - 15899856

Intron Length:

1728

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGT|GTAAGTAAT

5'SS Class:

major

3'SS Sequence:

TTTCCCCTTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATTTAAT

U12 Branch Point Sequence:

TATGATTTAATC

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.2

0.64

1.1

34.8

Major BPS

90.7

1.01

0.7

19.9

Major PPT

87.8

0.85

0.6

85.2

22.2

Minor 5ss

39.4

-1.2

2.9

52.2

44.4

Minor BPS

0.29

1.6

68.13

37.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000028530

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000038952

15897920 - 15900723

2804