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Intron Name: Anas_platyrhynchos_platyrhynchos_6_15934_18035_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

15934 - 18035

Intron Length:

2102

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAATGTTT

5'SS Class:

strong_major

3'SS Sequence:

CTCTTTACTGTAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TAAACAT

U12 Branch Point Sequence:

TTTCTCTTTACT

Flanking Amino Acid:

EYCSGGDLRKLLNKPENCCG

Intron Amino Acid Position:

118

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.6

0.77

81.4

Major BPS

63.2

0.33

1.1

69.6

35.7

Major PPT

78.4

0.64

0.8

74.1

29.4

Minor 5ss

42.7

-0.8

3.4

64.6

46.7

Minor BPS

72.2

0.78

1.6

89.51

34.3

Associated Gene:

Gene:

CHUK

Ensembl Gene ID:

ENSAPLG00000011503

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000039931

12183 - 46227

34045

ENSAPLT00000037450

14485 - 44896

30412

ENSAPLT00000012207

12183 - 45972

33790