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Intron Name: Anas_platyrhynchos_platyrhynchos_6_16041388_16047032_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

16041388 - 16047032

Intron Length:

5645

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGGTTAT

5'SS Class:

strong_major

3'SS Sequence:

CCTTTATCTTCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATATGAT

U12 Branch Point Sequence:

GTTCCTTTATCT

Flanking Amino Acid:

DVLARLIANQCPDQSCKQDL

Intron Amino Acid Position:

347

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.1

0.9

30.2

Major BPS

75.8

0.64

65.8

Major PPT

83.8

0.76

0.8

81.2

29.6

Minor 5ss

40.5

-1.1

3.2

57.3

47.4

Minor BPS

66.9

0.61

1.6

82.29

38.9

Associated Gene:

Gene:

CTNNA3

Ensembl Gene ID:

ENSAPLG00000004871

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005030

16028784 - 16238211

209428