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Intron Name: Anas_platyrhynchos_platyrhynchos_6_16047139_16109261_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

16047139 - 16109261

Intron Length:

62123

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

AAT|GCTATTAGA

5'SS Class:

weak_major

3'SS Sequence:

GTTTCATTTGAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAA

U12 Branch Point Sequence:

TTTTAAATAATG

Flanking Amino Acid:

YLKNKLMRGIMGRGPLKNTS

Intron Amino Acid Position:

311

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

55.8

0.14

1.5

60.6

43.7

Major BPS

90.4

0.7

90.2

19.3

Major PPT

72.2

0.5

1.1

72.3

37.1

Minor 5ss

23.6

-3

3.4

30.9

34.9

Minor BPS

49.6

-0.1

2.1

66.94

40.4

Associated Gene:

Gene:

CTNNA3

Ensembl Gene ID:

ENSAPLG00000004871

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005030

16028784 - 16238211

209428