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Intron Name: Anas_platyrhynchos_platyrhynchos_6_16188609_16215635_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

16188609 - 16215635

Intron Length:

27027

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTATGACTT

5'SS Class:

strong_major

3'SS Sequence:

TGTTTTGCTACAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTGTAT

U12 Branch Point Sequence:

TTGTTTGTATGT

Flanking Amino Acid:

ANHIETLCPQVINAALALSA

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.2

0.81

0.9

77.2

37.7

Major BPS

71.5

0.53

1.4

71.7

44.6

Major PPT

82.4

0.73

0.9

76.6

37.7

Minor 5ss

-0.7

3.1

65.1

46.1

Minor BPS

43.6

-0.4

2.3

66.16

45.4

Associated Gene:

Gene:

CTNNA3

Ensembl Gene ID:

ENSAPLG00000004871

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005030

16028784 - 16238211

209428