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Intron Name: Anas_platyrhynchos_platyrhynchos_6_16233667_16238178_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

16233667 - 16238178

Intron Length:

4512

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAACAAA

5'SS Class:

strong_major

3'SS Sequence:

CTATCTTTTGCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTGTAAT

U12 Branch Point Sequence:

AGTACTGTAATG

Flanking Amino Acid:

CKKTRDLRRQLRKAIIDHIS

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.7

0.75

76.5

34.2

Major BPS

72.1

0.55

1.2

73.3

39.1

Major PPT

85.3

0.79

0.8

80.3

31.3

Minor 5ss

-1.3

48.1

47.6

Minor BPS

47.8

-0.3

2.1

54.95

40.7

Associated Gene:

Gene:

CTNNA3

Ensembl Gene ID:

ENSAPLG00000004871

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000037106

16233377 - 16238211

4835

ENSAPLT00000005030

16028784 - 16238211

209428