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Intron Name: Anas_platyrhynchos_platyrhynchos_6_16411252_16469210_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

16411252 - 16469210

Intron Length:

57959

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGACCA

5'SS Class:

strong_major

3'SS Sequence:

CTTTTGCTGACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTGAAAT

U12 Branch Point Sequence:

TTTTGCTGACAG

Flanking Amino Acid:

LDYLAFKRQQDLKSSNQRDE

Intron Amino Acid Position:

195

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.4

0.93

0.8

74.4

Major BPS

67.2

0.43

1.2

73.3

39.1

Major PPT

76.3

0.59

72.2

37.9

Minor 5ss

32.2

-2

40.3

45.3

Minor BPS

46.4

-0.4

2.2

61.48

45.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000017220

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000045660

16393064 - 16510512

117449