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Intron Name: Anas_platyrhynchos_platyrhynchos_6_16528551_16529771_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

16528551 - 16529771

Intron Length:

1221

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAA|GTAAGTAAA

5'SS Class:

strong_major

3'SS Sequence:

TGCTTTTGCCAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TATTAAT

U12 Branch Point Sequence:

AATGTATTAATG

Flanking Amino Acid:

PQSSKNPDSPSNFIIPDPPF

Intron Amino Acid Position:

187

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.7

0.89

0.9

23.6

Major BPS

91.8

1.04

0.7

90.2

19.3

Major PPT

63.4

0.3

1.1

63.1

42.2

Minor 5ss

36.8

-1.5

2.7

42.6

38.4

Minor BPS

49.9

-0.1

1.7

55.59

Associated Gene:

Gene:

DNAJC12

Ensembl Gene ID:

ENSAPLG00000004592

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000004724

16528504 - 16536240

7737