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Intron Name: Anas_platyrhynchos_platyrhynchos_6_16531382_16531842_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

16531382 - 16531842

Intron Length:

461

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTAATCAAT

5'SS Class:

major

3'SS Sequence:

GTTTGTGTTCTAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTAGCAT

U12 Branch Point Sequence:

TTGGCTTTAGCA

Flanking Amino Acid:

PQPVVCCLIYVENFQKLQQA

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

73.9

0.56

1.1

72.5

38.4

Major BPS

63.3

0.33

1.5

41.2

Major PPT

74.4

0.55

65.8

45.3

Minor 5ss

41.3

-1

2.9

54.6

43.8

Minor BPS

60.7

0.33

1.7

70.71

42.1

Associated Gene:

Gene:

DNAJC12

Ensembl Gene ID:

ENSAPLG00000004592

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000020561

16526945 - 16536240

9296

ENSAPLT00000004724

16528504 - 16536240

7737