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Intron Name: Anas_platyrhynchos_platyrhynchos_6_16531909_16533359_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

16531909 - 16533359

Intron Length:

1451

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTATGTATT

5'SS Class:

strong_major

3'SS Sequence:

TTTTGAAAACTAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

ATTTTTTGAAAA

Flanking Amino Acid:

PDKHPGNPKAVTLEEGNLRE

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

91.9

0.99

0.8

92.6

23.2

Major BPS

96.5

1.15

0.6

34.2

Major PPT

61.1

0.25

1.1

54.4

44.1

Minor 5ss

47.8

-0.2

2.5

68.3

42.6

Minor BPS

60.7

0.33

1.5

71.57

33.8

Associated Gene:

Gene:

DNAJC12

Ensembl Gene ID:

ENSAPLG00000004592

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000020561

16526945 - 16536240

9296

ENSAPLT00000004724

16528504 - 16536240

7737