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Intron Name: Anas_platyrhynchos_platyrhynchos_6_16540309_16540776_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

16540309 - 16540776

Intron Length:

468

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

ATG|GCGGACGGG

5'SS Class:

weak_major

3'SS Sequence:

GGACGCGGCGGAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

CGAGGAC

U12 Branch Point Sequence:

CCGGCGAGGACG

Flanking Amino Acid:

MAAAGCGRGQR

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

53.6

0.09

1.2

44.4

40.2

Major BPS

39.1

-0.6

1.3

26.5

33.4

Major PPT

40.2

-0.5

1.6

30.6

36.6

Minor 5ss

18.1

-3.7

24.9

39.7

Minor BPS

33.4

-1.4

2.2

31.29

41.5

Associated Gene:

Gene:

SIRT1

Ensembl Gene ID:

ENSAPLG00000004304

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000004445

16540306 - 16559105

18800