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Intron Name: Anas_platyrhynchos_platyrhynchos_6_16551674_16555814_F


Intron Information:

Intron Rank:
7

Intron Class:
major

Intron Phase:
0

Intron Coordinates:
16551674 - 16555814

Intron Length:
4141

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
CAG|GTAAAAACT

5'SS Class:
strong_major

3'SS Sequence:
TGTTCTACTGCAG|G

3'SS Class:
strong_PPT

U2 Branch Point Sequence:
TGGTAAT

U12 Branch Point Sequence:
GTAATCTAAGCT

Flanking Amino Acid:
EVVRGDIFNQVVPRCPRCPP

Intron Amino Acid Position:
269

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
83.7
0.79
0.9
80.5
31.7

Major BPS
69.2
0.48
1.3
69.7
44.2

Major PPT
80.5
0.69
0.9
74.6
34.9

Minor 5ss
35.5
-1.7
3.1
50.2
45.8

Minor BPS
47.7
-0
1.9
66.13
44.1

Associated Gene:

Gene:
SIRT1

Ensembl Gene ID:

Chromosome:
6

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

16540306 - 16559105
18800

16540306 - 16559105
18800