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Intron Name: Anas_platyrhynchos_platyrhynchos_6_16575646_16578628_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

16575646 - 16578628

Intron Length:

2983

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTAAGAGTT

5'SS Class:

strong_major

3'SS Sequence:

ATTCTCATTCTAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

TTATTCTCATTC

Flanking Amino Acid:

NWVQQQVFGMLTDTPVTICT

Intron Amino Acid Position:

642

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.6

0.84

0.9

80.7

31.6

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

75.9

0.58

0.8

67.6

38.3

Minor 5ss

36.5

-1.5

3.6

53.2

Minor BPS

53.4

0.08

1.8

67.01

38.9

Associated Gene:

Gene:

HERC4

Ensembl Gene ID:

ENSAPLG00000002766

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000034780

16568042 - 16600132

32091