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Intron Name: Anas_platyrhynchos_platyrhynchos_6_16624462_16634251_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

16624462 - 16634251

Intron Length:

9790

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAATGCTT

5'SS Class:

strong_major

3'SS Sequence:

TTTTTATTGGCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

TCCTTTTTATTG

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.6

0.72

75.3

40.4

Major BPS

96.5

1.15

0.6

34.2

Major PPT

83.6

0.76

0.9

81.4

35.2

Minor 5ss

36.8

-1.5

3.5

56.4

47.8

Minor BPS

50.5

-0.1

1.6

53.46

Associated Gene:

Gene:

MYPN

Ensembl Gene ID:

ENSAPLG00000002627

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000002660

16623947 - 16677929

53983