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Intron Name: Anas_platyrhynchos_platyrhynchos_6_16724950_16725507_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

16724950 - 16725507

Intron Length:

558

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGGGGATG

5'SS Class:

major

3'SS Sequence:

CTCTCTTATTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCTTAC

U12 Branch Point Sequence:

GTATTCTTACTT

Flanking Amino Acid:

LGKHKERIGHRYIEIFKSSK

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.64

69.5

42.7

Major BPS

81.5

0.78

0.9

71.6

36.1

Major PPT

81.8

0.72

0.8

80.5

30.3

Minor 5ss

-2.4

3.4

38.2

Minor BPS

63.7

0.51

1.6

76.98

39.8

Associated Gene:

Gene:

HNRNPH3

Ensembl Gene ID:

ENSAPLG00000001116

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000043232

16723706 - 16728497

4792

ENSAPLT00000001187

16723706 - 16728863

5158