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Intron Name: Anas_platyrhynchos_platyrhynchos_6_16725696_16726093_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

16725696 - 16726093

Intron Length:

398

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GTG|GTATGTTTA

5'SS Class:

strong_major

3'SS Sequence:

CTCACTTGTACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TAATCAT

U12 Branch Point Sequence:

TTTCTCTCACTT

Flanking Amino Acid:

MRRGGGGYDGGYGGFDDYGG

Intron Amino Acid Position:

149

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.3

0.76

0.9

78.5

31.3

Major BPS

80.4

0.76

80.3

31.8

Major PPT

73.3

0.52

67.5

37.8

Minor 5ss

50.1

0.01

2.4

63.4

43.4

Minor BPS

54.4

0.22

1.8

77.15

39.7

Associated Gene:

Gene:

HNRNPH3

Ensembl Gene ID:

ENSAPLG00000001116

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000001187

16723706 - 16728863

5158

ENSAPLT00000043232

16723706 - 16728497

4792