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Intron Name: Anas_platyrhynchos_platyrhynchos_6_16726181_16726481_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

16726181 - 16726481

Intron Length:

301

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAAAAAT

5'SS Class:

strong_major

3'SS Sequence:

TGTGTTTTTCTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TACTTAC

U12 Branch Point Sequence:

GTTTTCTTGGCT

Flanking Amino Acid:

GYDDRMRDGRGMGGHGYGGA

Intron Amino Acid Position:

178

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.4

0.81

0.9

83.1

28.4

Major BPS

73.7

0.59

0.9

63.6

35.1

Major PPT

80.9

0.69

0.9

73.5

41.9

Minor 5ss

34.5

-1.8

3.1

48.5

47.2

Minor BPS

48.8

-0

3.5

83.36

37.8

Associated Gene:

Gene:

HNRNPH3

Ensembl Gene ID:

ENSAPLG00000001116

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000001187

16723706 - 16728863

5158

ENSAPLT00000043232

16723706 - 16728497

4792