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Intron Name: Anas_platyrhynchos_platyrhynchos_6_16726601_16727792_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

16726601 - 16727792

Intron Length:

1192

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAT|GTAAGTACA

5'SS Class:

strong_major

3'SS Sequence:

TTTTTATTTTCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

TCGTTTTTATTT

Flanking Amino Acid:

FRATENDIANFFSPLNPIRV

Intron Amino Acid Position:

218

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.1

0.83

82.7

29.2

Major BPS

96.5

1.15

0.6

34.2

Major PPT

94.3

0.6

93.1

23.6

Minor 5ss

38.4

-1.3

2.7

48.5

40.3

Minor BPS

57.4

0.31

1.6

70.24

42.1

Associated Gene:

Gene:

HNRNPH3

Ensembl Gene ID:

ENSAPLG00000001116

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000043232

16723706 - 16728497

4792

ENSAPLT00000001187

16723706 - 16728863

5158