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Intron Name: Anas_platyrhynchos_platyrhynchos_6_16735994_16736616_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

16735994 - 16736616

Intron Length:

623

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAA|GTAAATTCT

5'SS Class:

major

3'SS Sequence:

TCTTTTTTTTAAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TATACAT

U12 Branch Point Sequence:

CTTTTTTTTAAG

Flanking Amino Acid:

ETQEIINLKKEFLKLQEKNR

Intron Amino Acid Position:

470

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.6

0.65

77.6

31.2

Major BPS

74.9

0.62

81.3

29.9

Major PPT

84.6

0.78

0.9

90.3

22.8

Minor 5ss

43.9

-0.7

2.9

59.4

39.3

Minor BPS

49.8

-0.1

1.8

59.36

42.7

Associated Gene:

Gene:

RUFY2

Ensembl Gene ID:

ENSAPLG00000015834

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000016535

16732492 - 16757161

24670